Index

_

__init__() (ogstools.meshlib.boundary.Layer method) (ogstools.meshlib.boundary.LocationFrame method) (ogstools.meshlib.boundary.Raster method) (ogstools.meshlib.boundary_set.LayerSet method) (ogstools.meshlib.boundary_subset.Surface method) (ogstools.meshlib.Layer method) (ogstools.meshlib.LayerSet method) (ogstools.meshlib.LocationFrame method) (ogstools.meshlib.mesh_series.MeshSeries method) (ogstools.meshlib.mesh_series.TimeSeriesReader method) (ogstools.meshlib.MeshSeries method) (ogstools.meshlib.Raster method) (ogstools.meshlib.region.region.RegionSet method) (ogstools.meshlib.region.RegionSet method) (ogstools.meshlib.Surface method) (ogstools.meshplotlib.plot_setup.PlotSetup method) (ogstools.physics.nuclearwasteheat.nuclearwaste.NuclearWaste method) (ogstools.physics.nuclearwasteheat.nuclearwaste.Repository method) (ogstools.propertylib.Matrix method) (ogstools.propertylib.Property method) (ogstools.propertylib.property.Matrix method) (ogstools.propertylib.property.Property method) (ogstools.propertylib.property.Scalar method) (ogstools.propertylib.property.Vector method) (ogstools.propertylib.Scalar method) (ogstools.propertylib.Vector method)

A

adaptive_rounding() (in module ogstools.meshplotlib.levels) add_colorbars() (in module ogstools.meshplotlib.core) add_grid_spacing() (in module ogstools.studies.convergence) (in module ogstools.studies.convergence.convergence) animate() (in module ogstools.meshplotlib.animation)

as_gml() (ogstools.meshlib.boundary.LocationFrame method) (ogstools.meshlib.LocationFrame method) as_vtu() (ogstools.meshlib.boundary.Raster method) (ogstools.meshlib.Raster method) assign_bulk_ids() (in module ogstools.feflowlib.tools) ax_aspect_limits (ogstools.meshplotlib.plot_setup.PlotSetup attribute)

B

bilinear_cmap (ogstools.propertylib.Property attribute) (ogstools.propertylib.property.Property attribute) bottom (ogstools.meshlib.boundary.Layer attribute) (ogstools.meshlib.Layer attribute) Boundary (class in ogstools.meshlib) (class in ogstools.meshlib.boundary)

BoundarySet (class in ogstools.meshlib.boundary_set) bounds() (ogstools.meshlib.boundary_set.BoundarySet method) (ogstools.meshlib.boundary_set.LayerSet method) (ogstools.meshlib.LayerSet method) box_boundaries() (ogstools.meshlib.region.region.RegionSet method) (ogstools.meshlib.region.RegionSet method)

C

categoric (ogstools.propertylib.Property attribute) (ogstools.propertylib.property.Property attribute) clear() (ogstools.meshlib.mesh_series.MeshSeries method) (ogstools.meshlib.MeshSeries method) closest_timestep() (ogstools.meshlib.mesh_series.MeshSeries method) (ogstools.meshlib.MeshSeries method) closest_timevalue() (ogstools.meshlib.mesh_series.MeshSeries method) (ogstools.meshlib.MeshSeries method) cmap_dict (ogstools.meshplotlib.plot_setup.PlotSetup attribute) cmap_dict_if_bilinear (ogstools.meshplotlib.plot_setup.PlotSetup attribute) cmap_if_mask (ogstools.meshplotlib.plot_setup.PlotSetup attribute) cmap_str() (ogstools.meshplotlib.plot_setup.PlotSetup method) combine_material_properties() (in module ogstools.feflowlib) (in module ogstools.feflowlib.tools) combined_colorbar (ogstools.meshplotlib.plot_setup.PlotSetup attribute) convergence_metrics() (in module ogstools.studies.convergence) (in module ogstools.studies.convergence.convergence)

convergence_metrics_evolution() (in module ogstools.studies.convergence) (in module ogstools.studies.convergence.convergence) convergence_order() (in module ogstools.studies.convergence.convergence) convert_geometry_mesh() (in module ogstools.feflowlib) convert_properties_mesh() (in module ogstools.feflowlib) create_raster() (ogstools.meshlib.boundary.Layer method) (ogstools.meshlib.boundary_set.LayerSet method) (ogstools.meshlib.Layer method) (ogstools.meshlib.LayerSet method) create_raster_file() (ogstools.meshlib.boundary_subset.Surface method) (ogstools.meshlib.Surface method) create_rasters() (ogstools.meshlib.boundary_set.LayerSet method) (ogstools.meshlib.LayerSet method) cuboid() (in module ogstools.meshlib) (in module ogstools.meshlib.gmsh_meshing) custom_cmap (ogstools.meshplotlib.plot_setup.PlotSetup attribute)

D

data_name (ogstools.propertylib.Matrix attribute) (ogstools.propertylib.Property attribute) (ogstools.propertylib.property.Matrix attribute) (ogstools.propertylib.property.Property attribute) (ogstools.propertylib.property.Scalar attribute) (ogstools.propertylib.property.Vector attribute) (ogstools.propertylib.Scalar attribute) (ogstools.propertylib.Vector attribute) data_unit (ogstools.propertylib.Property attribute) (ogstools.propertylib.property.Property attribute)

deactivate_cells() (in module ogstools.feflowlib) (in module ogstools.feflowlib.tools) decay_consts (ogstools.physics.nuclearwasteheat.nuclearwaste.NuclearWaste attribute) default_cmap (ogstools.meshplotlib.plot_setup.PlotSetup attribute) dim() (ogstools.meshlib.Boundary method) (ogstools.meshlib.boundary.Boundary method) (ogstools.meshlib.boundary.Layer method) (ogstools.meshlib.Layer method) dim_from_len() (in module ogstools.propertylib.utils) dpi (ogstools.meshplotlib.plot_setup.PlotSetup attribute)

E

effective_pressure() (in module ogstools.propertylib.vector2scalar) embedded_region_names_color (ogstools.meshplotlib.plot_setup.PlotSetup attribute) extract_cell_boundary_conditions() (in module ogstools.feflowlib) (in module ogstools.feflowlib.tools)

extract_point_boundary_conditions() (in module ogstools.feflowlib) (in module ogstools.feflowlib.tools)

F

factor (ogstools.physics.nuclearwasteheat.nuclearwaste.NuclearWaste attribute) fig_aspect_limits (ogstools.meshplotlib.plot_setup.PlotSetup attribute) fig_scale (ogstools.meshplotlib.plot_setup.PlotSetup attribute) filenames() (ogstools.meshlib.boundary_set.BoundarySet method) (ogstools.meshlib.boundary_set.LayerSet method) (ogstools.meshlib.LayerSet method) find_cells_at_nodes() (in module ogstools.msh2vtu) find_connected_domain_cells() (in module ogstools.msh2vtu)

find_property_preset() (in module ogstools.propertylib.presets) fix_scientific_offset_position() (in module ogstools.meshplotlib.core) frame (ogstools.meshlib.boundary.Raster attribute) (ogstools.meshlib.Raster attribute) from_dict() (ogstools.meshplotlib.plot_setup.PlotSetup class method) from_pandas() (ogstools.meshlib.boundary_set.LayerSet class method) (ogstools.meshlib.LayerSet class method) func() (ogstools.propertylib.Property method) (ogstools.propertylib.property.Property method)

G

Gaussian2D() (in module ogstools.meshlib.boundary_subset) get_cmap_norm() (in module ogstools.meshplotlib.core) get_combined_levels() (in module ogstools.meshplotlib.core) get_data() (in module ogstools.meshplotlib.core) get_data_aspect() (in module ogstools.meshplotlib.core) get_level_boundaries() (in module ogstools.meshplotlib.core) get_levels() (in module ogstools.meshplotlib.levels) get_mask() (ogstools.propertylib.Property method) (ogstools.propertylib.property.Property method)

get_material_properties() (in module ogstools.feflowlib.tools) get_output_unit() (ogstools.propertylib.Property method) (ogstools.propertylib.property.Property method) get_specific_surface() (in module ogstools.feflowlib) (in module ogstools.feflowlib.tools) grid_convergence() (in module ogstools.studies.convergence) (in module ogstools.studies.convergence.convergence)

H

heat() (ogstools.physics.nuclearwasteheat.nuclearwaste.NuclearWaste method) (ogstools.physics.nuclearwasteheat.nuclearwaste.Repository method)

helpFormat (class in ogstools.feflowlib) (class in ogstools.feflowlib.tools)

I

identity() (in module ogstools.propertylib.utils) invert_colorbar (ogstools.meshplotlib.plot_setup.PlotSetup attribute)

is_mask() (ogstools.propertylib.Property method) (ogstools.propertylib.property.Property method)

J

jupyter_to_html() (in module ogstools.workflow) (in module ogstools.workflow.jupyter_conversion)

jupytext_to_jupyter() (in module ogstools.workflow) (in module ogstools.workflow.jupyter_conversion)

L

Layer (class in ogstools.meshlib) (class in ogstools.meshlib.boundary) layer_to_simplified_mesh() (in module ogstools.meshlib.region.region) LayerSet (class in ogstools.meshlib) (class in ogstools.meshlib.boundary_set) layout (ogstools.meshplotlib.plot_setup.PlotSetup attribute) length (ogstools.meshplotlib.plot_setup.PlotSetup attribute) liquid_flow() (in module ogstools.feflowlib) (in module ogstools.feflowlib.templates)

LocationFrame (class in ogstools.meshlib) (class in ogstools.meshlib.boundary) log_fit() (in module ogstools.studies.convergence) (in module ogstools.studies.convergence.convergence) log_magnitude (ogstools.propertylib.property.Vector property) (ogstools.propertylib.Vector property) log_scaled (ogstools.meshplotlib.plot_setup.PlotSetup attribute)

M

magnitude (ogstools.propertylib.Matrix property) (ogstools.propertylib.Property property) (ogstools.propertylib.property.Matrix property) (ogstools.propertylib.property.Property property) (ogstools.propertylib.property.Vector property) (ogstools.propertylib.Vector property) mask (ogstools.propertylib.Property attribute) (ogstools.propertylib.property.Property attribute) material_id (ogstools.meshlib.boundary.Layer attribute) (ogstools.meshlib.boundary_subset.Surface property) (ogstools.meshlib.Layer attribute) (ogstools.meshlib.Surface property) material_names (ogstools.meshplotlib.plot_setup.PlotSetup attribute) materials_in_liquid_flow() (in module ogstools.feflowlib.tools) materials_in_steady_state_diffusion() (in module ogstools.feflowlib.tools) Matrix (class in ogstools.propertylib) (class in ogstools.propertylib.property) MeshSeries (class in ogstools.meshlib) (class in ogstools.meshlib.mesh_series) module ogstools ogstools.definitions ogstools.feflowlib ogstools.feflowlib.templates ogstools.feflowlib.tools ogstools.meshlib ogstools.meshlib.boundary ogstools.meshlib.boundary_set ogstools.meshlib.boundary_subset ogstools.meshlib.gmsh_meshing ogstools.meshlib.mesh_series ogstools.meshlib.refine_mesh ogstools.meshlib.region ogstools.meshlib.region.region ogstools.meshplotlib ogstools.meshplotlib.animation ogstools.meshplotlib.core ogstools.meshplotlib.levels ogstools.meshplotlib.plot_features ogstools.meshplotlib.plot_setup ogstools.meshplotlib.plot_setup_defaults ogstools.msh2vtu ogstools.msh2vtu.tools ogstools.msh2vtu.tools.result2bc ogstools.physics ogstools.physics.nuclearwasteheat ogstools.physics.nuclearwasteheat.defaults ogstools.physics.nuclearwasteheat.nuclearwaste ogstools.propertylib ogstools.propertylib.presets ogstools.propertylib.property ogstools.propertylib.utils ogstools.propertylib.vector2scalar ogstools.studies ogstools.studies.convergence ogstools.studies.convergence.convergence ogstools.studies.convergence.study ogstools.workflow ogstools.workflow.jupyter_conversion

msh2vtu() (in module ogstools.msh2vtu) my_remove_orphaned_nodes() (in module ogstools.msh2vtu)

N

name (ogstools.physics.nuclearwasteheat.nuclearwaste.NuclearWaste attribute) nice_num() (in module ogstools.meshplotlib.levels) nice_range() (in module ogstools.meshplotlib.levels) NuclearWaste (class in ogstools.physics.nuclearwasteheat.nuclearwaste) nuclide_powers (ogstools.physics.nuclearwasteheat.nuclearwaste.NuclearWaste attribute)

num_bundles (ogstools.physics.nuclearwasteheat.nuclearwaste.NuclearWaste attribute) num_levels (ogstools.meshplotlib.plot_setup.PlotSetup attribute) num_streamline_interp_pts (ogstools.meshplotlib.plot_setup.PlotSetup attribute) num_subdivisions (ogstools.meshlib.boundary.Layer attribute) (ogstools.meshlib.Layer attribute)

O

ogstools module ogstools.definitions module ogstools.feflowlib module ogstools.feflowlib.templates module ogstools.feflowlib.tools module ogstools.meshlib module ogstools.meshlib.boundary module ogstools.meshlib.boundary_set module ogstools.meshlib.boundary_subset module ogstools.meshlib.gmsh_meshing module ogstools.meshlib.mesh_series module ogstools.meshlib.refine_mesh module ogstools.meshlib.region module ogstools.meshlib.region.region module ogstools.meshplotlib module ogstools.meshplotlib.animation module ogstools.meshplotlib.core module ogstools.meshplotlib.levels module ogstools.meshplotlib.plot_features module ogstools.meshplotlib.plot_setup module ogstools.meshplotlib.plot_setup_defaults module

ogstools.msh2vtu module ogstools.msh2vtu.tools module ogstools.msh2vtu.tools.result2bc module ogstools.physics module ogstools.physics.nuclearwasteheat module ogstools.physics.nuclearwasteheat.defaults module ogstools.physics.nuclearwasteheat.nuclearwaste module ogstools.propertylib module ogstools.propertylib.presets module ogstools.propertylib.property module ogstools.propertylib.utils module ogstools.propertylib.vector2scalar module ogstools.studies module ogstools.studies.convergence module ogstools.studies.convergence.convergence module ogstools.studies.convergence.study module ogstools.workflow module ogstools.workflow.jupyter_conversion module output_name (ogstools.propertylib.Property attribute) (ogstools.propertylib.property.Property attribute) output_unit (ogstools.propertylib.Property attribute) (ogstools.propertylib.property.Property attribute)

P

p_max (ogstools.meshplotlib.plot_setup.PlotSetup attribute) p_min (ogstools.meshplotlib.plot_setup.PlotSetup attribute) plot() (in module ogstools.meshplotlib) (in module ogstools.meshplotlib.core) plot_contour() (in module ogstools.meshplotlib) (in module ogstools.meshplotlib.plot_features) plot_convergence() (in module ogstools.studies.convergence) (in module ogstools.studies.convergence.convergence) plot_convergence_error_evolution() (in module ogstools.studies.convergence) (in module ogstools.studies.convergence.convergence) plot_convergence_errors() (in module ogstools.studies.convergence) (in module ogstools.studies.convergence.convergence)

plot_convergence_order_evolution() (in module ogstools.studies.convergence) (in module ogstools.studies.convergence.convergence) plot_element_edges() (in module ogstools.meshplotlib.plot_features) plot_layer_boundaries() (in module ogstools.meshplotlib.plot_features) plot_on_top() (in module ogstools.meshplotlib) (in module ogstools.meshplotlib.plot_features) plot_streamlines() (in module ogstools.meshplotlib.plot_features) PlotSetup (class in ogstools.meshplotlib.plot_setup) points_and_cells() (in module ogstools.feflowlib) print_info() (in module ogstools.msh2vtu) Property (class in ogstools.propertylib) (class in ogstools.propertylib.property)

Q

qp_ratio() (in module ogstools.propertylib.vector2scalar)

R

Raster (class in ogstools.meshlib) (class in ogstools.meshlib.boundary) rcParams (ogstools.meshplotlib.plot_setup.PlotSetup attribute) rcParams_scaled (ogstools.meshplotlib.plot_setup.PlotSetup property) read() (ogstools.meshlib.mesh_series.MeshSeries method) (ogstools.meshlib.MeshSeries method) read_closest() (ogstools.meshlib.mesh_series.MeshSeries method) (ogstools.meshlib.MeshSeries method) read_data() (ogstools.meshlib.mesh_series.TimeSeriesReader method) read_interp() (ogstools.meshlib.mesh_series.MeshSeries method) (ogstools.meshlib.MeshSeries method) rect() (in module ogstools.meshlib) (in module ogstools.meshlib.gmsh_meshing)

refine() (in module ogstools.meshlib.refine_mesh) RegionSet (class in ogstools.meshlib.region) (class in ogstools.meshlib.region.region) replace() (ogstools.propertylib.Property method) (ogstools.propertylib.property.Property method) Repository (class in ogstools.physics.nuclearwasteheat.nuclearwaste) resample() (in module ogstools.studies.convergence.convergence) reset() (ogstools.meshplotlib.plot_setup.PlotSetup method) resolution (ogstools.meshlib.boundary.Raster attribute) (ogstools.meshlib.Raster attribute) richardson_extrapolation() (in module ogstools.studies.convergence) (in module ogstools.studies.convergence.convergence) run_convergence_study() (in module ogstools.studies.convergence) (in module ogstools.studies.convergence.study)

S

save_animation() (in module ogstools.meshplotlib.animation) Scalar (class in ogstools.propertylib) (class in ogstools.propertylib.property) setup_prj_file() (in module ogstools.feflowlib) (in module ogstools.feflowlib.tools) show_element_edges (ogstools.meshplotlib.plot_setup.PlotSetup attribute) show_region_bounds (ogstools.meshplotlib.plot_setup.PlotSetup attribute) steady_state_diffusion() (in module ogstools.feflowlib) (in module ogstools.feflowlib.templates)

strip_units() (ogstools.propertylib.Property method) (ogstools.propertylib.property.Property method) subplot() (in module ogstools.meshplotlib) (in module ogstools.meshplotlib.core) Surface (class in ogstools.meshlib) (class in ogstools.meshlib.boundary_subset) sym_tensor_to_mat() (in module ogstools.propertylib.utils)

T

time_deposit (ogstools.physics.nuclearwasteheat.nuclearwaste.NuclearWaste attribute) time_deposit() (ogstools.physics.nuclearwasteheat.nuclearwaste.Repository method) time_interim (ogstools.physics.nuclearwasteheat.nuclearwaste.NuclearWaste attribute) timeline() (in module ogstools.meshplotlib.animation) TimeSeriesReader (class in ogstools.meshlib.mesh_series) timesteps (ogstools.meshlib.mesh_series.MeshSeries property) (ogstools.meshlib.MeshSeries property) timevalues (ogstools.meshlib.mesh_series.MeshSeries property) (ogstools.meshlib.MeshSeries property) title_center (ogstools.meshplotlib.plot_setup.PlotSetup attribute) title_left (ogstools.meshplotlib.plot_setup.PlotSetup attribute) title_right (ogstools.meshplotlib.plot_setup.PlotSetup attribute) to_boundary() (in module ogstools.meshlib.region) (in module ogstools.meshlib.region.region)

to_region_prism() (in module ogstools.meshlib.region) (in module ogstools.meshlib.region.region) to_region_simplified() (in module ogstools.meshlib.region) (in module ogstools.meshlib.region.region) to_region_tetraeder() (in module ogstools.meshlib.region) (in module ogstools.meshlib.region.region) to_region_voxel() (in module ogstools.meshlib.region) (in module ogstools.meshlib.region.region) top (ogstools.meshlib.boundary.Layer attribute) (ogstools.meshlib.Layer attribute) trace (ogstools.propertylib.Matrix property) (ogstools.propertylib.property.Matrix property) trace() (in module ogstools.propertylib.vector2scalar) type_name (ogstools.propertylib.Property property) (ogstools.propertylib.property.Property property)

U

update_geometry() (in module ogstools.feflowlib)

V

Vector (class in ogstools.propertylib) (class in ogstools.propertylib.property)

von_mises() (in module ogstools.propertylib.vector2scalar)

W

waste (ogstools.physics.nuclearwasteheat.nuclearwaste.Repository attribute) write_mesh_of_combined_properties() (in module ogstools.feflowlib) (in module ogstools.feflowlib.tools)

write_point_boundary_conditions() (in module ogstools.feflowlib) (in module ogstools.feflowlib.tools)

X

x_label (ogstools.meshplotlib.plot_setup.PlotSetup attribute) xmax (ogstools.meshlib.boundary.LocationFrame attribute) (ogstools.meshlib.LocationFrame attribute)

xmin (ogstools.meshlib.boundary.LocationFrame attribute) (ogstools.meshlib.LocationFrame attribute)

Y

y_label (ogstools.meshplotlib.plot_setup.PlotSetup attribute) y_update_offset_text_position() (in module ogstools.meshplotlib.core) ymax (ogstools.meshlib.boundary.LocationFrame attribute) (ogstools.meshlib.LocationFrame attribute)

ymin (ogstools.meshlib.boundary.LocationFrame attribute) (ogstools.meshlib.LocationFrame attribute)